Simplistic Metabolic Model of the 2017 UNCA iGEM Project. (TCEasy)
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Updated
Nov 10, 2017 - Jupyter Notebook
Synthetic biology (SynBio) is a multidisciplinary area of research that seeks to create new biological parts, devices, and systems, or to redesign systems that are already found in nature.
Simplistic Metabolic Model of the 2017 UNCA iGEM Project. (TCEasy)
Convert rpSBML file to SBOL + CSV files ready to be used by DNA-Bot.
A web tool that removes restriction sites from given DNA sequences.
Annotate safe regions for gene editing and replace/recode codons.
An API for the Java-based synthetic biology simulation tool, iBioSim.
A protocol to enable the exchange of goods and services on the Bionet
Do-It-Yourself Cell Incubator with Arduino!
Jupyter notebooks for BFG-PCA related simulation and analysis.
Official development repository for the iGEM IISER Thiruvananthapuram 2021 team wiki.
Additional data for matser_thesis in UST
My code as part of the Dry Lab team at iGEM McGill
ALLEGRO: An Algorithm Leveraging Linear Programing to Enhance Guide RNA Optimization
A Go package for designing DNA.
🌠 Easily download genomes and build BLAST/Bowtie indexes in Python
demonstration of methods implemented in my thesis "Robustness assessment of the biological processor using hyperellipsoids"
2021 International Genetically Engineered Machine competition
Website of Manipal Biomachines | iGEM MIT_MAHE
Blog on the computational side of synthetic biology and DNA manufacturing
Designing synthetic bacterial communities for predictable plant phenotypes